DISCO - Directory of Structures for Crossdocking

Generate CrossDocking Benchmark

To generate a benchmark for your desired targets, use our free on-line system below. To begin...

Submit the email address to which the results should be sent. This is done only for the purpose of validation and providing results. None of your information will be retained.
Submit the 8 character validation code which will be emailed to you.
Provide the input for the targets you wish to generate crossdocking sets for. Your input should be formatted as follows...

Your input must be a list of targets separated by new lines.
The input for each target should contain three fields separated by white space...
- Target Name - How the target will be referenced in the directory structure (Optional)
- PDB ID of Target Reference - The 4 character Protein Data Bank ID for your receptor (The specific chain ID may be indicated with a colon followed by the chain ID. eg. 3EML:A)
- Ligand ID - The 3 character ID for the ligand of interest in your receptor (The specific chain ID may be indicated with a colon followed by the chain ID. eg. ZMA:A)
The submission form only checks for the structural validity of your input. Any Target for which the PDB ID or Ligand ID will be eliminated.

After submitting your input, your results will be emailed to you as soon as they are ready. This may take several minutes, to several hours or more, contingent upon size of the request and traffic.
Your results will be made available on the site for 24 hours after you are emailed.

See the help page for more information on how to use the generator.

Please enter your email address

Cross Docking Benchmark is provided by the Camacho Laboratory at University of Pittsburgh and is developed by Shayne Wierbowski of the University of Scranton and Jim Zheng of the University of Pittsburgh.